STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21739.1Homologs of previously reported genes of unknown function. (492 aa)    
Predicted Functional Partners:
ppk
Polyphosphate kinase, component of RNA degradosome; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
 
   
 0.817
ppx
Ppx1.
 
  
 0.698
CBH21029.1
Putative Exopolyphosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
  
 0.610
CBH21738.1
Putative Membrane spanning protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
       0.565
kbl
Glycine C-acetyltransferase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.
  
    0.489
CBH20183.1
Putative Radical SAM domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.439
CBH20259.1
Radical SAM domain protein.
   
    0.439
CBH20823.1
Putative Radical SAM domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
   
    0.439
CBH20825.1
Radical SAM domain protein.
   
    0.439
CBH20826.1
Radical SAM domain protein.
   
    0.439
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.