Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBH21170.1 | CBH21313.1 | CLOST_1047 | CLOST_1193 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.583 |
| CBH21170.1 | CBH21763.1 | CLOST_1047 | CLOST_1643 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.465 |
| CBH21170.1 | murB | CLOST_1047 | CLOST_1659 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | UDP-N-acetylenolpyruvoylglucosamine reductase 2 (UDP-N-acetylmuramate dehydrogenase 2); Cell wall formation. | 0.455 |
| CBH21170.1 | pfkA | CLOST_1047 | CLOST_1648 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 6-phosphofructokinase I; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.497 |
| CBH21170.1 | pykF | CLOST_1047 | CLOST_1647 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | Pyruvate kinase I; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the pyruvate kinase family. | 0.552 |
| CBH21170.1 | rsmB | CLOST_1047 | CLOST_1852 | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.611 |
| CBH21313.1 | CBH21170.1 | CLOST_1193 | CLOST_1047 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.583 |
| CBH21313.1 | CBH21763.1 | CLOST_1193 | CLOST_1643 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.563 |
| CBH21313.1 | rsmB | CLOST_1193 | CLOST_1852 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.596 |
| CBH21313.1 | trmB | CLOST_1193 | CLOST_1935 | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase); Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.612 |
| CBH21763.1 | CBH21170.1 | CLOST_1643 | CLOST_1047 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. | 0.465 |
| CBH21763.1 | CBH21313.1 | CLOST_1643 | CLOST_1193 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Putative RNA methylase, NOL1/NOP2/sun family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.563 |
| CBH21763.1 | CBH21764.1 | CLOST_1643 | CLOST_1644 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Membrane protein of unknown function; No homology to any previously reported sequences. | 0.739 |
| CBH21763.1 | murB | CLOST_1643 | CLOST_1659 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | UDP-N-acetylenolpyruvoylglucosamine reductase 2 (UDP-N-acetylmuramate dehydrogenase 2); Cell wall formation. | 0.496 |
| CBH21763.1 | pfkA | CLOST_1643 | CLOST_1648 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 6-phosphofructokinase I; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.523 |
| CBH21763.1 | pykF | CLOST_1643 | CLOST_1647 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Pyruvate kinase I; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the pyruvate kinase family. | 0.529 |
| CBH21763.1 | rsmB | CLOST_1643 | CLOST_1852 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.440 |
| CBH21763.1 | trmB | CLOST_1643 | CLOST_1935 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase); Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.512 |
| CBH21763.1 | whiA | CLOST_1643 | CLOST_1654 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Conserved protein of unknown function; Involved in cell division and chromosome segregation. | 0.490 |
| CBH21763.1 | yhdE | CLOST_1643 | CLOST_1396 | Uncharacterized RNA methyltransferase BCE_0363; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | Putative septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.849 |
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