STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hymA-2HymA protein. (157 aa)    
Predicted Functional Partners:
hymB
Putative [Fe] hydrogenase, electron-transfer subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
 0.999
CBH22412.1
NADH dehydrogenase (Quinone).
 0.995
CBH22411.1
Molybdopterin oxidoreductase.
  
 0.983
hymC
Putative catalytic subunit of iron-only hydrogenase ([Fe] hydrogenase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 0.962
CBH22033.1
Homologs of previously reported genes of unknown function.
   
 
 0.851
rnfB
Electron transport complex, RnfABCDGE type, B subunit precursor; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 0.822
CBH22078.1
Lysophospholipase L2.
   
   0.793
CBH20616.1
4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 0.770
CBH21085.1
Homologs of previously reported genes of unknown function.
  
 0.770
fdhA
Formate dehydrogenase alpha chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.744
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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