Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CBH21790.1 | CBH21791.1 | CLOST_1670 | CLOST_1671 | Homologs of previously reported genes of unknown function. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.697 |
CBH21790.1 | CBH21792.1 | CLOST_1670 | CLOST_1672 | Homologs of previously reported genes of unknown function. | Protein of unknown function; No homology to any previously reported sequences. | 0.657 |
CBH21791.1 | CBH21790.1 | CLOST_1671 | CLOST_1670 | Exported protein of unknown function; No homology to any previously reported sequences. | Homologs of previously reported genes of unknown function. | 0.697 |
CBH21791.1 | CBH21792.1 | CLOST_1671 | CLOST_1672 | Exported protein of unknown function; No homology to any previously reported sequences. | Protein of unknown function; No homology to any previously reported sequences. | 0.727 |
CBH21791.1 | CBH21793.1 | CLOST_1671 | CLOST_1673 | Exported protein of unknown function; No homology to any previously reported sequences. | Protein of unknown function; No homology to any previously reported sequences. | 0.418 |
CBH21791.1 | recA | CLOST_1671 | CLOST_1679 | Exported protein of unknown function; No homology to any previously reported sequences. | DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.494 |
CBH21792.1 | CBH21790.1 | CLOST_1672 | CLOST_1670 | Protein of unknown function; No homology to any previously reported sequences. | Homologs of previously reported genes of unknown function. | 0.657 |
CBH21792.1 | CBH21791.1 | CLOST_1672 | CLOST_1671 | Protein of unknown function; No homology to any previously reported sequences. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.727 |
CBH21792.1 | CBH21793.1 | CLOST_1672 | CLOST_1673 | Protein of unknown function; No homology to any previously reported sequences. | Protein of unknown function; No homology to any previously reported sequences. | 0.440 |
CBH21793.1 | CBH21791.1 | CLOST_1673 | CLOST_1671 | Protein of unknown function; No homology to any previously reported sequences. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.418 |
CBH21793.1 | CBH21792.1 | CLOST_1673 | CLOST_1672 | Protein of unknown function; No homology to any previously reported sequences. | Protein of unknown function; No homology to any previously reported sequences. | 0.440 |
recA | CBH21791.1 | CLOST_1679 | CLOST_1671 | DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | Exported protein of unknown function; No homology to any previously reported sequences. | 0.494 |