STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hinTPurine nucleoside phosphoramidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (113 aa)    
Predicted Functional Partners:
CBH21909.1
Homologs of previously reported genes of unknown function.
 
   0.774
CBH21910.1
Conserved protein of unknown function; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
    
 0.752
CBH21462.1
Putative cell adhesion protein (contact hemolysin TlyA-related); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
      0.719
rpsU
30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.
  
    0.591
CBH21906.1
gatB/Yqey domain protein.
     
 0.582
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.581
CBH21169.1
Putative helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 
  0.568
CBH22033.1
Homologs of previously reported genes of unknown function.
   
   0.540
rpoZ
Omega subunit of RNA polymerase (modular protein); Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
  0.523
purD
Phosphoribosylamine--glycine ligase (modular protein); Belongs to the GARS family.
  
   0.504
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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