STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH21918.1Exported protein of unknown function; No homology to any previously reported sequences. (156 aa)    
Predicted Functional Partners:
CBH21917.1
Membrane protein.
 
 
 0.975
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.845
fliY
Flagellar motor switching and energizing phosphatase; Function of homologous gene experimentally demonstrated in an other organism; cell process.
    
   0.822
CBH22375.1
Ribonucleoside-triphosphate reductase, adenosylcobalamin-dependent.
  
 
 0.757
hymB
Putative [Fe] hydrogenase, electron-transfer subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
   0.750
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.698
ahpC
Alkyl hydroperoxide reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
  
 0.656
CBH22523.1
Putative peroxiredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 0.656
CBH20510.1
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
 0.647
acoL
Dihydrolipoamide dehydrogenase.
  
 0.647
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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