STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Cooccurrence
Coexpression
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[Homology]
Score
nadRPutative regulator of de-novo NAD biosythesis NadR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (173 aa)    
Predicted Functional Partners:
CBH22123.1
Protein of unknown function; No homology to any previously reported sequences.
       0.773
CBH22121.1
Regulatory protein (pfoS/R).
 
     0.702
CBH22124.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.542
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
  
 0.504
frlD
Fructoselysine 6-kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.
      0.451
nadC
Quinolinate phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NadC/ModD family.
  
  
 0.450
CBH22125.1
Glyoxalase family protein superfamily.
       0.440
CBH22120.1
GPR1/FUN34/yaaH family protein.
       0.401
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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