STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBH22136.1Homologs of previously reported genes of unknown function. (84 aa)    
Predicted Functional Partners:
CBH22134.1
Homologs of previously reported genes of unknown function.
 
     0.945
CBH22135.1
Homologs of previously reported genes of unknown function; Belongs to the sulfur carrier protein TusA family.
 
     0.935
CBH22133.1
Homologs of previously reported genes of unknown function.
 
   
 0.753
CBH22201.1
Homologs of previously reported genes of unknown function.
  
     0.447
CBH21342.1
Aminotransferase class I and II.
  
     0.445
CBH20202.1
Homologs of previously reported genes of unknown function.
  
     0.435
CBH21354.1
Glutamine synthetase, catalytic region.
  
     0.427
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.