STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH22324.1Extracellular ligand-binding receptor precursor. (391 aa)    
Predicted Functional Partners:
CBH22322.1
Inner-membrane translocator precursor; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.999
livH
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
livF
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
 
 0.988
livG
Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.
 
  
  0.988
CBH20374.1
Ethanolamine utilization response regulator.
  
 
 0.857
CBH22325.1
Protein of unknown function; No homology to any previously reported sequences.
       0.773
CBH21170.1
Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.
  
 
 0.648
CBH20696.1
FAD-dependent pyridine nucleotide-disulphide oxidoreductase precursor; Belongs to the sulfur carrier protein TusA family.
  
 
 0.547
tufB
Protein chain elongation factor EF-Tu (duplicate of tufA); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.513
rpmE
50S ribosomal subunit protein L31; Binds the 23S rRNA.
  
    0.485
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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