Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBH20134.1 | CBH20349.1 | CLOST_0002 | CLOST_0219 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DEAD_2. | 0.847 |
| CBH20134.1 | CBH22350.1 | CLOST_0002 | CLOST_2230 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Putative uncharacterized protein (PrdD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.980 |
| CBH20134.1 | polA | CLOST_0002 | CLOST_1407 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.995 |
| CBH20134.1 | uvrX | CLOST_0002 | CLOST_0055 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | Lesion bypass phage DNA polymerase; Function of strongly homologous gene; enzyme. | 0.980 |
| CBH20349.1 | CBH20134.1 | CLOST_0219 | CLOST_0002 | DEAD_2. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.847 |
| CBH20349.1 | CBH22350.1 | CLOST_0219 | CLOST_2230 | DEAD_2. | Putative uncharacterized protein (PrdD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.860 |
| CBH20349.1 | polA | CLOST_0219 | CLOST_1407 | DEAD_2. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.958 |
| CBH20349.1 | uvrX | CLOST_0219 | CLOST_0055 | DEAD_2. | Lesion bypass phage DNA polymerase; Function of strongly homologous gene; enzyme. | 0.523 |
| CBH22347.1 | CBH22349.1 | CLOST_2227 | CLOST_2229 | Conserved membrane protein of unknown function (PrdG); Homologs of previously reported genes of unknown function. | Putative uncharacterized protein (PrdE); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.916 |
| CBH22347.1 | CBH22350.1 | CLOST_2227 | CLOST_2230 | Conserved membrane protein of unknown function (PrdG); Homologs of previously reported genes of unknown function. | Putative uncharacterized protein (PrdD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.915 |
| CBH22347.1 | CBH22352.1 | CLOST_2227 | CLOST_2233 | Conserved membrane protein of unknown function (PrdG); Homologs of previously reported genes of unknown function. | Homologs of previously reported genes of unknown function. | 0.881 |
| CBH22347.1 | pdrB | CLOST_2227 | CLOST_2232 | Conserved membrane protein of unknown function (PrdG); Homologs of previously reported genes of unknown function. | D-proline reductase gamma chain; D-proline reductase catalyzes the reductive cleavage of a C-N bond in D-proline resulting in the formation of 5-aminovalerate. The alpha subunit has been shown to bind D-proline, presumably via the pyruvoyl group. | 0.878 |
| CBH22347.1 | polA | CLOST_2227 | CLOST_1407 | Conserved membrane protein of unknown function (PrdG); Homologs of previously reported genes of unknown function. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.418 |
| CBH22347.1 | prdC | CLOST_2227 | CLOST_2236 | Conserved membrane protein of unknown function (PrdG); Homologs of previously reported genes of unknown function. | Electron transfer protein; Function of homologous gene experimentally demonstrated in an other organism; putative carrier. | 0.837 |
| CBH22347.1 | prdF | CLOST_2227 | CLOST_2228 | Conserved membrane protein of unknown function (PrdG); Homologs of previously reported genes of unknown function. | Proline racemase A precursor (TcPRACA) (TcPA45-A) (rTcPA45); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the proline racemase family. | 0.745 |
| CBH22349.1 | CBH22347.1 | CLOST_2229 | CLOST_2227 | Putative uncharacterized protein (PrdE); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Conserved membrane protein of unknown function (PrdG); Homologs of previously reported genes of unknown function. | 0.916 |
| CBH22349.1 | CBH22350.1 | CLOST_2229 | CLOST_2230 | Putative uncharacterized protein (PrdE); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Putative uncharacterized protein (PrdD); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | 0.995 |
| CBH22349.1 | CBH22352.1 | CLOST_2229 | CLOST_2233 | Putative uncharacterized protein (PrdE); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Homologs of previously reported genes of unknown function. | 0.915 |
| CBH22349.1 | pdrB | CLOST_2229 | CLOST_2232 | Putative uncharacterized protein (PrdE); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | D-proline reductase gamma chain; D-proline reductase catalyzes the reductive cleavage of a C-N bond in D-proline resulting in the formation of 5-aminovalerate. The alpha subunit has been shown to bind D-proline, presumably via the pyruvoyl group. | 0.977 |
| CBH22349.1 | prdC | CLOST_2229 | CLOST_2236 | Putative uncharacterized protein (PrdE); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. | Electron transfer protein; Function of homologous gene experimentally demonstrated in an other organism; putative carrier. | 0.880 |
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