STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH22483.1Exported protein of unknown function; No homology to any previously reported sequences. (570 aa)    
Predicted Functional Partners:
CBH22484.1
S-layer protein/ peptidoglycan endo-beta-N-acetylglucosaminidase, putative (modular protein).
       0.538
CBH20480.1
S-layer domain protein precursor.
  
     0.518
CBH20292.1
Homologs of previously reported genes of unknown function.
  
     0.512
CBH21458.1
Homologs of previously reported genes of unknown function.
  
     0.462
CBH21346.1
UspA.
  
     0.453
CBH22402.1
Exported protein of unknown function; No homology to any previously reported sequences.
  
     0.447
CBH20664.1
Periplasmic binding protein/LacI transcriptional regulator.
  
     0.436
CBH22482.1
Exported protein of unknown function; No homology to any previously reported sequences.
       0.434
CBH21859.1
Protein of unknown function; No homology to any previously reported sequences.
  
     0.416
CBH21606.1
Homologs of previously reported genes of unknown function; Belongs to the UPF0473 family.
  
     0.409
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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