STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH22586.1Homologs of previously reported genes of unknown function. (228 aa)    
Predicted Functional Partners:
CBH22583.1
Radical SAM domain protein.
 
     0.750
CBH21759.1
RNA polymerase, alpha subunit domain protein.
  
     0.719
CBH22584.1
Homologs of previously reported genes of unknown function.
       0.714
CBH22585.1
Ribosomal-protein-alanine acetyltransferase.
       0.714
CBH22582.1
Homologs of previously reported genes of unknown function.
       0.709
CBH21757.1
Helicase domain protein.
  
     0.652
CBH22564.1
Homologs of previously reported genes of unknown function.
  
     0.638
CBH22581.1
Homologs of previously reported genes of unknown function.
 
     0.595
CBH21536.1
Homologs of previously reported genes of unknown function.
  
     0.566
CBH22539.1
Homologs of previously reported genes of unknown function.
  
     0.531
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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