STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBH22610.1ABC transporter, ATP-binding protein. (238 aa)    
Predicted Functional Partners:
CBH20583.1
Abc transporter, permease protein.
 
 0.992
CBH22611.1
ABC transporter, permease protein.
 
 
 0.960
yecS
Putative transporter subunit: permease component of ABC superfamily transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.
 
 
  
 0.886
CBH21239.1
Nucleoside transport ATP-binding protein (fragment).
 
     
0.875
mef
Macrolide-efflux protein.
 
   
 0.821
CBH22664.1
Putative Integral membrane protein (Permease); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
 
 
 0.811
CBH22609.1
Homologs of previously reported genes of unknown function.
       0.737
CBH20912.1
Homologs of previously reported genes of unknown function.
 
 
 0.733
CBH20344.1
Homologs of previously reported genes of unknown function.
  
 
 0.683
CBH22613.1
Transcriptional regulator, TetR family.
 
 
 
 0.667
Your Current Organism:
Acetoanaerobium sticklandii
NCBI taxonomy Id: 1511
Other names: A. sticklandii, ATCC 12662, BCRC 14485, CCRC 14485, CCRC:14485, CCUG 9281, Clostridium sticklandii, DSM 519, NCIMB 10654, strain StadtmanHF
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