STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO63330.1Sporulation protein; Probably functions as a manganese efflux pump. (207 aa)    
Predicted Functional Partners:
KHO61923.1
Spore gernimation protein; PFAM: Spore germination B3/ GerAC like, C-terminal; TIGRFAM: germination protein, Ger(x)C family.
  
    0.584
KHO62391.1
PFAM: Stage III sporulation protein AE (spore_III_AE); TIGRFAM: stage III sporulation protein AE.
  
     0.580
KHO63331.1
PFAM: AhpC/TSA family.
       0.561
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
  
    0.552
KHO62388.1
PFAM: Stage III sporulation protein AB (spore_III_AB); TIGRFAM: stage III sporulation protein AB.
  
     0.551
KHO63329.1
PFAM: Protein of unknown function (DUF503).
       0.527
KHO61857.1
Spore coat protein; PFAM: YabP family; TIGRFAM: sporulation protein YabP.
  
   
 0.524
KHO62438.1
PFAM: Protein of unknown function (DUF2953).
  
     0.486
KHO61921.1
PFAM: Spore germination protein; TIGRFAM: spore germination protein (amino acid permease).
  
     0.480
KHO62407.1
PFAM: SpoIVB peptidase S55; TIGRFAM: stage IV sporulation protein B.
  
     0.478
Your Current Organism:
Thermoanaerobacter sp. YS13
NCBI taxonomy Id: 1511746
Other names: T. sp. YS13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.