STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO61711.1PFAM: AAA domain. (266 aa)    
Predicted Functional Partners:
KHO61710.1
Integrase; PFAM: Homeodomain-like domain; Mu transposase, C-terminal; Integrase core domain.
     0.935
KHO61709.1
Hypothetical protein.
 
     0.857
KHO62117.1
Integrase; PFAM: Homeodomain-like domain; Mu transposase, C-terminal; Integrase core domain.
     0.775
KHO62424.1
Integrase; PFAM: Homeodomain-like domain; Mu transposase, C-terminal; Integrase core domain.
     0.775
KHO63236.1
Integrase; PFAM: Homeodomain-like domain; Mu transposase, C-terminal; Integrase core domain.
     0.775
KHO60928.1
Integrase; PFAM: Homeodomain-like domain; Mu transposase, C-terminal; Integrase core domain.
     0.775
KHO62116.1
Hypothetical protein.
 
     0.746
KHO60929.1
Hypothetical protein.
 
     0.746
KHO62426.1
Hypothetical protein.
 
     0.743
KHO61865.1
Hypothetical protein.
  
     0.740
Your Current Organism:
Thermoanaerobacter sp. YS13
NCBI taxonomy Id: 1511746
Other names: T. sp. YS13
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