STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GI32_CLOSYUnannotated protein. (568 aa)    
Predicted Functional Partners:
E7GP56_CLOSY
Unannotated protein.
  
 
 0.686
E7GT60_CLOSY
Unannotated protein.
 
 
 0.554
E7GP55_CLOSY
Unannotated protein.
 
 
 0.499
E7GH95_CLOSY
Unannotated protein.
 
 
 0.492
E7GJM1_CLOSY
Unannotated protein.
 
 
 0.469
E7GH62_CLOSY
Unannotated protein.
  
  
 0.458
E7GQP4_CLOSY
Unannotated protein.
  
  
 0.458
fmt
Unannotated protein; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.458
E7GHA1_CLOSY
Unannotated protein.
  
 
 0.422
E7GHG5_CLOSY
Unannotated protein.
  
 
 0.422
Your Current Organism:
Clostridium symbiosum
NCBI taxonomy Id: 1512
Other names: ATCC 14940, Bacteroides symbiosus, DSM 934, [. symbiosum, [Clostridium] symbiosum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.