Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7GI22_CLOSY | E7GJ90_CLOSY | GCA_900049235_00599 | GCA_900049235_01073 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.722 |
E7GI22_CLOSY | GCA_900049235_01072 | GCA_900049235_00599 | GCA_900049235_01072 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.487 |
E7GI22_CLOSY | carB | GCA_900049235_00599 | GCA_900049235_00172 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein. | 0.842 |
E7GI22_CLOSY | dapA-2 | GCA_900049235_00599 | GCA_900049235_04474 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.550 |
E7GI22_CLOSY | dapF | GCA_900049235_00599 | GCA_900049235_01374 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.465 |
E7GI22_CLOSY | dapF-2 | GCA_900049235_00599 | GCA_900049235_01377 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.465 |
E7GI22_CLOSY | murE | GCA_900049235_00599 | GCA_900049235_04414 | Unannotated protein; Belongs to the aspartokinase family. | Unannotated protein; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. | 0.543 |
E7GJ90_CLOSY | E7GI22_CLOSY | GCA_900049235_01073 | GCA_900049235_00599 | Unannotated protein. | Unannotated protein; Belongs to the aspartokinase family. | 0.722 |
E7GJ90_CLOSY | E7GRW0_CLOSY | GCA_900049235_01073 | GCA_900049235_03949 | Unannotated protein. | Unannotated protein. | 0.874 |
E7GJ90_CLOSY | E7GT56_CLOSY | GCA_900049235_01073 | GCA_900049235_04430 | Unannotated protein. | Unannotated protein; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate. | 0.905 |
E7GJ90_CLOSY | GCA_900049235_01072 | GCA_900049235_01073 | GCA_900049235_01072 | Unannotated protein. | Unannotated protein. | 0.992 |
E7GJ90_CLOSY | GCA_900049235_04429 | GCA_900049235_01073 | GCA_900049235_04429 | Unannotated protein. | Unannotated protein. | 0.817 |
E7GJ90_CLOSY | carB | GCA_900049235_01073 | GCA_900049235_00172 | Unannotated protein. | Unannotated protein. | 0.873 |
E7GJ90_CLOSY | dapA-2 | GCA_900049235_01073 | GCA_900049235_04474 | Unannotated protein. | Unannotated protein; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). | 0.708 |
E7GJ90_CLOSY | dapF | GCA_900049235_01073 | GCA_900049235_01374 | Unannotated protein. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.898 |
E7GJ90_CLOSY | dapF-2 | GCA_900049235_01073 | GCA_900049235_01377 | Unannotated protein. | Unannotated protein; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. | 0.898 |
E7GJ90_CLOSY | murE | GCA_900049235_01073 | GCA_900049235_04414 | Unannotated protein. | Unannotated protein; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. | 0.864 |
E7GRW0_CLOSY | E7GJ90_CLOSY | GCA_900049235_03949 | GCA_900049235_01073 | Unannotated protein. | Unannotated protein. | 0.874 |
E7GRW0_CLOSY | GCA_900049235_01072 | GCA_900049235_03949 | GCA_900049235_01072 | Unannotated protein. | Unannotated protein. | 0.874 |
E7GRW0_CLOSY | carB | GCA_900049235_03949 | GCA_900049235_00172 | Unannotated protein. | Unannotated protein. | 0.871 |
page 1 of 4