Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
E7GJ38_CLOSY | E7GNA9_CLOSY | GCA_900049235_01019 | GCA_900049235_02600 | Unannotated protein. | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | 0.812 |
E7GJ38_CLOSY | hisD | GCA_900049235_01019 | GCA_900049235_03254 | Unannotated protein. | Unannotated protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.989 |
E7GLP1_CLOSY | E7GNA9_CLOSY | GCA_900049235_02000 | GCA_900049235_02600 | Unannotated protein. | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | 0.812 |
E7GLP1_CLOSY | hisD | GCA_900049235_02000 | GCA_900049235_03254 | Unannotated protein. | Unannotated protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.946 |
E7GNA8_CLOSY | E7GNA9_CLOSY | GCA_900049235_02598 | GCA_900049235_02600 | Unannotated protein. | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | 0.581 |
E7GNA8_CLOSY | GCA_900049235_02599 | GCA_900049235_02598 | GCA_900049235_02599 | Unannotated protein. | Unannotated protein. | 0.596 |
E7GNA9_CLOSY | E7GJ38_CLOSY | GCA_900049235_02600 | GCA_900049235_01019 | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | Unannotated protein. | 0.812 |
E7GNA9_CLOSY | E7GLP1_CLOSY | GCA_900049235_02600 | GCA_900049235_02000 | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | Unannotated protein. | 0.812 |
E7GNA9_CLOSY | E7GNA8_CLOSY | GCA_900049235_02600 | GCA_900049235_02598 | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | Unannotated protein. | 0.581 |
E7GNA9_CLOSY | E7GNB0_CLOSY | GCA_900049235_02600 | GCA_900049235_02601 | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.429 |
E7GNA9_CLOSY | GCA_900049235_02599 | GCA_900049235_02600 | GCA_900049235_02599 | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | Unannotated protein. | 0.746 |
E7GNA9_CLOSY | hisD | GCA_900049235_02600 | GCA_900049235_03254 | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | Unannotated protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.906 |
E7GNA9_CLOSY | ybeY | GCA_900049235_02600 | GCA_900049235_04342 | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.465 |
E7GNB0_CLOSY | E7GNA9_CLOSY | GCA_900049235_02601 | GCA_900049235_02600 | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | 0.429 |
E7GNB0_CLOSY | GCA_900049235_02599 | GCA_900049235_02601 | GCA_900049235_02599 | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | Unannotated protein. | 0.416 |
GCA_900049235_02599 | E7GNA8_CLOSY | GCA_900049235_02599 | GCA_900049235_02598 | Unannotated protein. | Unannotated protein. | 0.596 |
GCA_900049235_02599 | E7GNA9_CLOSY | GCA_900049235_02599 | GCA_900049235_02600 | Unannotated protein. | Unannotated protein; Belongs to the PHP hydrolase family. HisK subfamily. | 0.746 |
GCA_900049235_02599 | E7GNB0_CLOSY | GCA_900049235_02599 | GCA_900049235_02601 | Unannotated protein. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.416 |
hisD | E7GJ38_CLOSY | GCA_900049235_03254 | GCA_900049235_01019 | Unannotated protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Unannotated protein. | 0.989 |
hisD | E7GLP1_CLOSY | GCA_900049235_03254 | GCA_900049235_02000 | Unannotated protein; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | Unannotated protein. | 0.946 |
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