STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E7GS34_CLOSYUnannotated protein. (160 aa)    
Predicted Functional Partners:
E7GS33_CLOSY
Unannotated protein.
       0.714
E7GS32_CLOSY
Unannotated protein.
       0.668
GCA_900049235_04029
Unannotated protein.
       0.668
E7GUI6_CLOSY
Unannotated protein.
 
      0.639
ddl
Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.
 
    0.594
deoD
Unannotated protein.
    
  0.554
E7GKQ0_CLOSY
Unannotated protein; Belongs to the dGTPase family. Type 2 subfamily.
    
  0.523
Your Current Organism:
Clostridium symbiosum
NCBI taxonomy Id: 1512
Other names: ATCC 14940, Bacteroides symbiosus, DSM 934, [. symbiosum, [Clostridium] symbiosum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.