STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001296225_00757Unannotated protein. (193 aa)    
Predicted Functional Partners:
GCA_001296225_01600
Unannotated protein.
 
 0.994
GCA_001296225_00758
Unannotated protein.
 
 
 0.977
GCA_001296225_00756
Unannotated protein.
  
 0.968
GCA_001296225_00755
Unannotated protein.
 
 0.958
GCA_001296225_01179
Unannotated protein.
  
 
 0.953
GCA_001296225_00753
Unannotated protein.
 
 
 0.950
GCA_001296225_00483
Unannotated protein.
 
 
 0.947
GCA_001296225_03118
Unannotated protein.
    
  0.925
GCA_001296225_00165
Unannotated protein.
 
 
 0.916
GCA_001296225_01239
Unannotated protein.
 
 
 0.915
Your Current Organism:
Marinagarivorans algicola
NCBI taxonomy Id: 1513270
Other names: ATCC BAA-2617, CICC 10859, Gammaproteobacteria bacterium JL1, Gammaproteobacteria bacterium Z1, M. algicola, Marinagarivorans algicola Guo et al. 2016, strain Z1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.