STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMT64834.1Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology. (312 aa)    
Predicted Functional Partners:
KMT66288.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.869
KMT64859.1
GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.856
KMT66414.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.647
KMT65225.1
AP endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.610
KMT64850.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.599
KMT65224.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.474
KMT67062.1
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.446
Your Current Organism:
Catenovulum maritimum
NCBI taxonomy Id: 1513271
Other names: C. maritimum, CICC 10836, Catenovulum maritimum corrig. Li et al. 2016, Catenovulum maritimus, DSM 28813, Gammaproteobacteria bacterium Q1, Mariagarivorans maritimus, strain Q1
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