STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF01229.1Serine O-acetyltransferase. (264 aa)    
Predicted Functional Partners:
SMF78067.1
Cysteine synthase A.
 
 0.995
SMF01101.1
Cysteine synthase A.
 
 0.991
SME93217.1
Cystathionine beta-synthase.
 
 0.989
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.981
SMF39433.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
 
 0.926
SMF47040.1
Undecaprenyl-phosphate glucose phosphotransferase.
  
 
 0.898
SMF83069.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 
 0.898
SMF18515.1
Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
 0.887
SMF25255.1
Cystathionine gamma-synthase.
  
 
 0.873
SMF78954.1
Cystathionine beta-lyase.
  
 
 0.873
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.