STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF11217.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
SMF20373.1
Dimethylhistidine N-methyltransferase.
  
 
 0.899
SMF24890.1
Predicted glutamine amidotransferase.
  
 
 0.845
SMF24907.1
Transglutaminase-like superfamily protein.
  
 
 0.845
SME94924.1
Arylsulfatase A.
  
   0.843
SMF00526.1
YHYH protein.
  
   0.843
SMF28990.1
YHYH protein.
  
   0.843
SMF42491.1
YHYH protein.
  
   0.843
SMF58101.1
YHYH protein.
  
   0.843
SMF80005.1
YHYH protein.
  
   0.843
SMF84603.1
YHYH protein.
  
   0.843
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.