STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF16396.1Acyl-CoA thioesterase FadM. (179 aa)    
Predicted Functional Partners:
SMF64151.1
Polyketide synthase dehydratase.
  
 0.993
SMF64143.1
FabA-like domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.993
SMF30762.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
 
 0.989
SMF64164.1
Polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.988
SMF18082.1
Enediyne polyketide synthase.
  
 0.983
SMF30773.1
Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.979
SMF47161.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.973
SMF13222.1
Amino acid adenylation domain-containing protein.
  
 0.951
SME94801.1
Amino acid adenylation domain-containing protein.
  
 0.898
SME95929.1
Acyl carrier protein.
  
 0.891
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.