STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF20933.1Predicted NAD/FAD-binding protein. (432 aa)    
Predicted Functional Partners:
SMF53397.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
 0.902
SMF68975.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
 0.865
SMF53386.1
Cyclopropane-fatty-acyl-phospholipid synthase.
 
 0.843
SMF53408.1
Hypothetical protein.
 
  
 0.840
SME99724.1
Steroid 5-alpha reductase family enzyme.
    0.793
SMF16881.1
cation:H+ antiporter.
   
    0.634
SMF49413.1
cation:H+ antiporter.
   
    0.634
SMF83476.1
anti-ECFsigma factor, ChrR.
  
  
 0.616
SMF20928.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
       0.533
SMF60080.1
Transcriptional regulator, AraC family.
  
    0.525
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.