STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF30650.1Aerobic-type carbon monoxide dehydrogenase, small subunit, CoxS/CutS family. (174 aa)    
Predicted Functional Partners:
SMF30598.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.998
SMF42953.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.994
SMF54486.1
Xanthine dehydrogenase YagR molybdenum-binding subunit.
 0.994
SMF82398.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.994
SMF54497.1
Xanthine dehydrogenase YagS FAD-binding subunit.
 
 0.991
SMF42835.1
Isoquinoline 1-oxidoreductase, beta subunit.
 
 0.988
SMF31027.1
Isoquinoline 1-oxidoreductase/isoquinoline 1-oxidoreductase, beta subunit.
 
 0.986
SMF42852.1
CTP:molybdopterin cytidylyltransferase MocA.
 
 
 0.925
SMF82424.1
XdhC and CoxI family protein.
 
 
 0.924
SMF42742.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
  
  0.921
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.