STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF50077.1Cyclic nucleotide-binding domain-containing protein. (156 aa)    
Predicted Functional Partners:
SMF02411.1
Adenylate cyclase, class 3.
 
 0.979
SMF11447.1
Adenylate cyclase, class 3; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
 
 
 0.967
SMF83032.1
Adenylate cyclase.
 
 
 0.967
SMF77208.1
Signal transduction histidine kinase.
  
 0.964
SMF55493.1
Adenylate cyclase, class 3.
 
 
 0.961
SMF08220.1
Adenylate cyclase, class 3.
 
 
 0.960
SMF62529.1
Adenylate cyclase, class 3.
 
 
 0.956
SMF58014.1
Adenylate/guanylate cyclase.
 
 
 0.951
SMF55280.1
Tetratricopeptide repeat-containing protein.
   
 0.934
SMF69437.1
Chemotaxis phosphatase CheX.
   
 0.927
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.