STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF69647.1Flagellar protein FlbD. (64 aa)    
Predicted Functional Partners:
SMF69484.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
  
  
 0.837
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
    0.794
SMF66548.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
  
 0.761
SMF69638.1
Hypothetical protein.
       0.746
SMF69508.1
Type III secretion system ATPase, FliI/YscN.
  
  
 0.723
SMF66519.1
Flagellar biogenesis protein FliO.
  
  
 0.719
SMF66542.1
Flagellar motor switch protein FliM.
  
  
 0.715
SMF69493.1
Flagellar assembly protein FliH.
  
  
 0.712
flhB
Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.
  
  
 0.706
SMF66494.1
Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.
  
    0.682
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.