STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF70139.1Thioredoxin; Belongs to the thioredoxin family. (110 aa)    
Predicted Functional Partners:
SMF66183.1
Thioredoxin reductase (NADPH).
 
 0.969
SMF64506.1
Thioredoxin reductase.
  
 0.961
SMF62027.1
Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family.
  
 
 0.945
SMF36402.1
Thioredoxin reductase.
  
 0.940
SMF36406.1
Hypothetical protein.
  
 0.939
htpG
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
  
 
 0.927
groL
Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.
  
 
 0.917
SMF21835.1
Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
 
 
 0.878
SMF62482.1
Selenophosphate synthase.
   
 0.873
SME96940.1
Transketolase; Belongs to the transketolase family.
  
 
 0.869
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
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