STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMF81160.1DNA-binding transcriptional regulator, MarR family. (147 aa)    
Predicted Functional Partners:
SMF81153.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
    
 0.882
SMF58272.1
PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.
     
 0.796
SMF58275.1
Phosphocarrier protein HPr.
  
 
 0.751
SMF24954.1
Osmoprotectant transport system permease protein.
  
  
 0.738
SMF32979.1
Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit.
     
 0.733
SMF60142.1
Peroxiredoxin, Ohr subfamily.
  
 0.719
SMF71022.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
  
 
 0.716
SMF64151.1
Polyketide synthase dehydratase.
  
 
 0.660
SMF69754.1
Riboflavin synthase alpha chain.
  
 
 0.660
SMF00852.1
4,5-DOPA dioxygenase extradiol.
    
 0.659
Your Current Organism:
Pseudobacteriovorax antillogorgiicola
NCBI taxonomy Id: 1513793
Other names: Bdellovibrionales bacterium RKEM611, LMG 28452, LMG:28452, NCCB 100521, P. antillogorgiicola, Pseudobacteriovorax antillogorgiicola McCauley et al. 2015, strain RKEM611
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.