STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB63904.1Hypothetical protein. (48 aa)    
Predicted Functional Partners:
SKB63920.1
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
       0.762
SKB63938.1
Ferrous iron transport protein A.
       0.762
SKB63943.1
DNA-binding transcriptional regulator, MarR family.
       0.530
Your Current Organism:
Sphingobacterium nematocida
NCBI taxonomy Id: 1513896
Other names: CCTCC AB 2010390, DSM 24091, JCM 17339, S. nematocida, Sphingobacterium nematocida Liu et al. 2012, strain M-SX103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.