STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPB02329.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (413 aa)    
Predicted Functional Partners:
KPB02328.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.997
KPB02332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.916
KPB02330.1
Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.915
KPB01442.1
Isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.
 
 
 0.848
KPB02334.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
KPB02333.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
KPB02331.1
Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KPB02335.1
Tricarboxylate transport protein TctC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.690
KPB02337.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.664
pdxA
4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
 
  
  0.640
Your Current Organism:
Ahrensia marina
NCBI taxonomy Id: 1514904
Other names: A. marina, Ahrensia marina Liu et al. 2016, Ahrensia sp. LZD062, DSM 28886, JCM 30117, MCCC 1K00254, strain LZD062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.