STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPB01909.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
KPB01910.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.984
KPB01908.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.956
KPB01911.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.922
KPB01916.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.918
KPB01011.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.905
KPB02718.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.894
KPB02674.1
Alpha-glucoside ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.868
KPB01552.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.862
KPB00882.1
Maltose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  0.861
ugpE
Glycerol-3-phosphate ABC transporter permease; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
  0.855
Your Current Organism:
Ahrensia marina
NCBI taxonomy Id: 1514904
Other names: A. marina, Ahrensia marina Liu et al. 2016, Ahrensia sp. LZD062, DSM 28886, JCM 30117, MCCC 1K00254, strain LZD062
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.