STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KTG09695.1Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)    
Predicted Functional Partners:
KTG08479.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.753
AUR64_11320
Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.734
KTG10453.1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.718
rnp2
Ribonuclease P; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
  
     0.706
KTG08553.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
KTG09912.1
Transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
KTG09664.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
KTG09877.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.681
KTG08183.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.675
KTG11242.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0212 family.
  
     0.674
Your Current Organism:
Haloprofundus marisrubri
NCBI taxonomy Id: 1514971
Other names: CGMCC 1.14959, H. marisrubri, Halobacteriaceae archaeon SB9, Haloprofundus marisrubri Zhang et al. 2017, JCM 19565, strain SB9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.