STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG27501.1EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). (439 aa)    
Predicted Functional Partners:
SMG56398.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.850
SMG58036.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.849
SMG56236.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.836
SMG57777.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.836
SMG26579.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
0.832
SMG46070.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
 0.826
SMG57675.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 
 0.820
SMG31395.1
Hypothetical protein.
 
 0.817
SMG34048.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.816
SMG56099.1
Diguanylate cyclase/phosphodiesterase.
 
0.780
Your Current Organism:
Paraburkholderia susongensis
NCBI taxonomy Id: 1515439
Other names: Burkholderia sp. L226, Burkholderia susongensis, Burkholderia susongensis Gu et al. 2015, CCTCC AB 2014142, CCTCC:AB2014142, JCM 30231, P. susongensis, Paraburkholderia susongensis (Gu et al. 2015) Dobritsa and Samadpour 2016, strain L226
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