STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMG20603.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (259 aa)    
Predicted Functional Partners:
SMG56566.1
Acyl transferase domain-containing protein.
  
 0.842
SMG60406.1
ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific).
  
 0.793
SMG20568.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
    
  0.715
SMG60845.1
CDP-4-dehydro-6-deoxyglucose reductase.
 
 0.713
SMG20563.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    
0.706
SMG20595.1
NIPSNAP protein.
       0.693
SMG50134.1
Amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
  
 0.678
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
 0.656
SMG60160.1
Glutamate synthase (NADH) large subunit.
     
 0.655
SMG56441.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
   
 0.633
Your Current Organism:
Paraburkholderia susongensis
NCBI taxonomy Id: 1515439
Other names: Burkholderia sp. L226, Burkholderia susongensis, Burkholderia susongensis Gu et al. 2015, CCTCC AB 2014142, CCTCC:AB2014142, JCM 30231, P. susongensis, Paraburkholderia susongensis (Gu et al. 2015) Dobritsa and Samadpour 2016, strain L226
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