STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livFHigh-affinity branched-chain amino acid transport ATP-binding protein LivF. (292 aa)    
Predicted Functional Partners:
yadH
Inner membrane transport permease YadH.
  
 
 0.545
livH
High-affinity branched-chain amino acid transport system permease protein LivH.
  
     0.540
livH-2
High-affinity branched-chain amino acid transport system permease protein LivH.
  
     0.540
livM
High-affinity branched-chain amino acid transport system permease protein LivM.
  
     0.538
EVAR_1307_1
Peripla_BP_6 domain-containing protein.
  
     0.533
Igbp1b
Immunoglobulin-binding protein 1b.
    
  0.458
USP
Protein ultraspiracle homolog.
    
  0.407
USP-2
Protein ultraspiracle homolog.
    
  0.407
E75
Ecdysone-inducible protein E75.
    
  0.407
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.