Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Coq3 | EVAR_1460_1 | A0A4C1ZY04 | A0A4C1SI75 | Ubiquinone biosynthesis O-methyltransferase, mitochondrial. | SpoU_methylase domain-containing protein. | 0.472 |
Coq3 | EVAR_15627_1 | A0A4C1ZY04 | A0A4C1UHR0 | Ubiquinone biosynthesis O-methyltransferase, mitochondrial. | Probable transcriptional regulatory protein ETA_14870. | 0.466 |
EVAR_1460_1 | Coq3 | A0A4C1SI75 | A0A4C1ZY04 | SpoU_methylase domain-containing protein. | Ubiquinone biosynthesis O-methyltransferase, mitochondrial. | 0.472 |
EVAR_1460_1 | EVAR_15627_1 | A0A4C1SI75 | A0A4C1UHR0 | SpoU_methylase domain-containing protein. | Probable transcriptional regulatory protein ETA_14870. | 0.483 |
EVAR_1460_1 | EVAR_88638_1 | A0A4C1SI75 | A0A4C1X3Q9 | SpoU_methylase domain-containing protein. | tRNA (Guanine-N(7)-)-methyltransferase. | 0.516 |
EVAR_1460_1 | TRIT1 | A0A4C1SI75 | A0A4C1TZ78 | SpoU_methylase domain-containing protein. | tRNA dimethylallyltransferase. | 0.474 |
EVAR_1460_1 | Trit1 | A0A4C1SI75 | A0A4C1TZP6 | SpoU_methylase domain-containing protein. | tRNA dimethylallyltransferase. | 0.474 |
EVAR_1460_1 | kdsB | A0A4C1SI75 | A0A4C1Y378 | SpoU_methylase domain-containing protein. | 3-deoxy-manno-octulosonate cytidylyltransferase. | 0.474 |
EVAR_1460_1 | murG | A0A4C1SI75 | A0A4C1SKY5 | SpoU_methylase domain-containing protein. | annotation not available | 0.481 |
EVAR_1460_1 | rsmE | A0A4C1SI75 | A0A4C1YI35 | SpoU_methylase domain-containing protein. | Ribosomal RNA small subunit methyltransferase E. | 0.559 |
EVAR_1460_1 | trmB | A0A4C1SI75 | A0A4C1YHF6 | SpoU_methylase domain-containing protein. | tRNA (Guanine-N(7)-)-methyltransferase. | 0.516 |
EVAR_1460_1 | ubiG | A0A4C1SI75 | A0A4C1UFX4 | SpoU_methylase domain-containing protein. | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | 0.472 |
EVAR_15627_1 | Coq3 | A0A4C1UHR0 | A0A4C1ZY04 | Probable transcriptional regulatory protein ETA_14870. | Ubiquinone biosynthesis O-methyltransferase, mitochondrial. | 0.466 |
EVAR_15627_1 | EVAR_1460_1 | A0A4C1UHR0 | A0A4C1SI75 | Probable transcriptional regulatory protein ETA_14870. | SpoU_methylase domain-containing protein. | 0.483 |
EVAR_15627_1 | ubiG | A0A4C1UHR0 | A0A4C1UFX4 | Probable transcriptional regulatory protein ETA_14870. | Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family. | 0.466 |
EVAR_88638_1 | EVAR_1460_1 | A0A4C1X3Q9 | A0A4C1SI75 | tRNA (Guanine-N(7)-)-methyltransferase. | SpoU_methylase domain-containing protein. | 0.516 |
EVAR_88638_1 | TRIT1 | A0A4C1X3Q9 | A0A4C1TZ78 | tRNA (Guanine-N(7)-)-methyltransferase. | tRNA dimethylallyltransferase. | 0.555 |
EVAR_88638_1 | Trit1 | A0A4C1X3Q9 | A0A4C1TZP6 | tRNA (Guanine-N(7)-)-methyltransferase. | tRNA dimethylallyltransferase. | 0.555 |
EVAR_88638_1 | rsmE | A0A4C1X3Q9 | A0A4C1YI35 | tRNA (Guanine-N(7)-)-methyltransferase. | Ribosomal RNA small subunit methyltransferase E. | 0.485 |
TRIT1 | EVAR_1460_1 | A0A4C1TZ78 | A0A4C1SI75 | tRNA dimethylallyltransferase. | SpoU_methylase domain-containing protein. | 0.474 |
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