Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Dera | crr | A0A4C1SKR2 | A0A4C1UFJ8 | Deoxyribose-phosphate aldolase. | PTS system glucose-specific EIIA component. | 0.786 |
Dera | kdgR | A0A4C1SKR2 | A0A4C1SJE2 | Deoxyribose-phosphate aldolase. | HTH-type transcriptional regulator KdgR. | 0.835 |
Dera | mak | A0A4C1SKR2 | A0A4C1X467 | Deoxyribose-phosphate aldolase. | Fructokinase. | 0.727 |
Dera | pgm-2 | A0A4C1SKR2 | A0A4C1X5L4 | Deoxyribose-phosphate aldolase. | Phosphoglucomutase; Belongs to the phosphohexose mutase family. | 0.776 |
Dera | xylR-2 | A0A4C1SKR2 | A0A4C1SLC2 | Deoxyribose-phosphate aldolase. | Xylose repressor. | 0.727 |
Dera | xylR-3 | A0A4C1SKR2 | A0A4C1SLH0 | Deoxyribose-phosphate aldolase. | Xylose repressor. | 0.727 |
Dera-2 | crr | A0A4C1UJV1 | A0A4C1UFJ8 | Deoxyribose-phosphate aldolase. | PTS system glucose-specific EIIA component. | 0.786 |
Dera-2 | kdgR | A0A4C1UJV1 | A0A4C1SJE2 | Deoxyribose-phosphate aldolase. | HTH-type transcriptional regulator KdgR. | 0.835 |
Dera-2 | mak | A0A4C1UJV1 | A0A4C1X467 | Deoxyribose-phosphate aldolase. | Fructokinase. | 0.727 |
Dera-2 | pgm-2 | A0A4C1UJV1 | A0A4C1X5L4 | Deoxyribose-phosphate aldolase. | Phosphoglucomutase; Belongs to the phosphohexose mutase family. | 0.776 |
Dera-2 | xylR-2 | A0A4C1UJV1 | A0A4C1SLC2 | Deoxyribose-phosphate aldolase. | Xylose repressor. | 0.727 |
Dera-2 | xylR-3 | A0A4C1UJV1 | A0A4C1SLH0 | Deoxyribose-phosphate aldolase. | Xylose repressor. | 0.727 |
crr | Dera | A0A4C1UFJ8 | A0A4C1SKR2 | PTS system glucose-specific EIIA component. | Deoxyribose-phosphate aldolase. | 0.786 |
crr | Dera-2 | A0A4C1UFJ8 | A0A4C1UJV1 | PTS system glucose-specific EIIA component. | Deoxyribose-phosphate aldolase. | 0.786 |
crr | kdgR | A0A4C1UFJ8 | A0A4C1SJE2 | PTS system glucose-specific EIIA component. | HTH-type transcriptional regulator KdgR. | 0.784 |
crr | mak | A0A4C1UFJ8 | A0A4C1X467 | PTS system glucose-specific EIIA component. | Fructokinase. | 0.868 |
crr | pgm-2 | A0A4C1UFJ8 | A0A4C1X5L4 | PTS system glucose-specific EIIA component. | Phosphoglucomutase; Belongs to the phosphohexose mutase family. | 0.834 |
crr | sacA | A0A4C1UFJ8 | A0A4C1XGI1 | PTS system glucose-specific EIIA component. | Sucrose-6-phosphate hydrolase. | 0.878 |
crr | sacA-2 | A0A4C1UFJ8 | A0A4C1XL90 | PTS system glucose-specific EIIA component. | Sucrose-6-phosphate hydrolase. | 0.878 |
crr | scrB | A0A4C1UFJ8 | A0A4C1ZTV9 | PTS system glucose-specific EIIA component. | Sucrose-6-phosphate hydrolase. | 0.878 |
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