STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EVAR_71290_1Probable ATP-dependent RNA helicase DDX55 homolog. (159 aa)    
Predicted Functional Partners:
FTSJ3
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.988
EVAR_103290_1
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.986
Non1
Nucleolar GTP-binding protein 1.
   
 
 0.980
EVAR_50135_1
Probable rRNA-processing protein EBP2 homolog.
   
 0.977
EVAR_83573_1
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
  0.971
RpL24-like
Probable ribosome biogenesis protein RLP24.
   
 
 0.970
EVAR_55770_1
Nucleolar complex protein 2 homolog.
   
 
 0.969
Ns1
Guanine nucleotide-binding protein-like 3 homolog.
  
 0.967
EVAR_97344_1
Ribosome biogenesis protein BOP1 homolog.
   
 0.961
EVAR_97342_1
Ribosome biogenesis protein BOP1 homolog.
   
 0.961
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.