Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDIPT | EVAR_60123_1 | A0A4C1VR07 | A0A4C1ZRL7 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase. | CTP_transf_like domain-containing protein. | 0.852 |
CDIPT | iolG-2 | A0A4C1VR07 | A0A4C1SKC6 | CDP-diacylglycerol--inositol 3-phosphatidyltransferase. | Inositol 2-dehydrogenase. | 0.532 |
EVAR_60123_1 | CDIPT | A0A4C1ZRL7 | A0A4C1VR07 | CTP_transf_like domain-containing protein. | CDP-diacylglycerol--inositol 3-phosphatidyltransferase. | 0.852 |
EVAR_60123_1 | iolG-2 | A0A4C1ZRL7 | A0A4C1SKC6 | CTP_transf_like domain-containing protein. | Inositol 2-dehydrogenase. | 0.638 |
HMOX1 | iolG-2 | A0A4C1TS69 | A0A4C1SKC6 | Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. | Inositol 2-dehydrogenase. | 0.593 |
Odc1 | asd | A0A4C1ZHY8 | A0A4C1SHR6 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Aspartate-semialdehyde dehydrogenase. | 0.885 |
Odc1 | iolG-2 | A0A4C1ZHY8 | A0A4C1SKC6 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Inositol 2-dehydrogenase. | 0.541 |
Odc1 | xerC | A0A4C1ZHY8 | A0A4C1SLZ9 | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | Tyrosine recombinase XerC. | 0.889 |
asd | Odc1 | A0A4C1SHR6 | A0A4C1ZHY8 | Aspartate-semialdehyde dehydrogenase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.885 |
asd | iolG-2 | A0A4C1SHR6 | A0A4C1SKC6 | Aspartate-semialdehyde dehydrogenase. | Inositol 2-dehydrogenase. | 0.595 |
asd | lysA | A0A4C1SHR6 | A0A4C1YCM2 | Aspartate-semialdehyde dehydrogenase. | Diaminopimelate decarboxylase. | 0.885 |
asd | xerC | A0A4C1SHR6 | A0A4C1SLZ9 | Aspartate-semialdehyde dehydrogenase. | Tyrosine recombinase XerC. | 0.935 |
daf-36 | iolG-2 | A0A4C2A4R9 | A0A4C1SKC6 | Cholesterol 7-desaturase. | Inositol 2-dehydrogenase. | 0.510 |
gntK | iolG-2 | A0A4C1SK82 | A0A4C1SKC6 | Gluconokinase; Belongs to the gluconokinase GntK/GntV family. | Inositol 2-dehydrogenase. | 0.553 |
iolG-2 | CDIPT | A0A4C1SKC6 | A0A4C1VR07 | Inositol 2-dehydrogenase. | CDP-diacylglycerol--inositol 3-phosphatidyltransferase. | 0.532 |
iolG-2 | EVAR_60123_1 | A0A4C1SKC6 | A0A4C1ZRL7 | Inositol 2-dehydrogenase. | CTP_transf_like domain-containing protein. | 0.638 |
iolG-2 | HMOX1 | A0A4C1SKC6 | A0A4C1TS69 | Inositol 2-dehydrogenase. | Heme oxygenase; Heme oxygenase cleaves the heme ring at the alpha methene bridge to form biliverdin. Biliverdin is subsequently converted to bilirubin by biliverdin reductase. | 0.593 |
iolG-2 | Odc1 | A0A4C1SKC6 | A0A4C1ZHY8 | Inositol 2-dehydrogenase. | Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.541 |
iolG-2 | asd | A0A4C1SKC6 | A0A4C1SHR6 | Inositol 2-dehydrogenase. | Aspartate-semialdehyde dehydrogenase. | 0.595 |
iolG-2 | daf-36 | A0A4C1SKC6 | A0A4C2A4R9 | Inositol 2-dehydrogenase. | Cholesterol 7-desaturase. | 0.510 |
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