STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASTE1-2Protein asteroid homolog 1. (623 aa)    
Predicted Functional Partners:
EVAR_15971_1
Uncharacterized protein.
    
 0.717
EVAR_15972_1
Uncharacterized protein.
    
 0.717
EVAR_15969_1
ANK_REP_REGION domain-containing protein.
    
 0.717
EVAR_80578_1
DNA polymerase delta small subunit.
    
 0.713
EVAR_48683_1
SMN domain-containing protein.
    
 0.702
mus81
Crossover junction endonuclease MUS81.
    
 0.690
DNApol-delta
DNA polymerase.
   
 0.688
Snrpd1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.668
ddx20
Probable ATP-dependent RNA helicase DDX20; Belongs to the DEAD box helicase family.
   
 0.658
SmF
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.658
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.