Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DNMT1 | DNMT1-2 | A0A4C1W9L3 | A0A4C1WAM7 | Cytosine-specific methyltransferase. | DNA (Cytosine-5)-methyltransferase 1. | 0.487 |
DNMT1 | Grip84-2 | A0A4C1W9L3 | A0A4C1T0G4 | Cytosine-specific methyltransferase. | Gamma-tubulin complex component. | 0.683 |
DNMT1 | TUBG1 | A0A4C1W9L3 | A0A4C1WWW1 | Cytosine-specific methyltransferase. | Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. | 0.814 |
DNMT1 | Tubgcp3 | A0A4C1W9L3 | A0A4C1UYC5 | Cytosine-specific methyltransferase. | Gamma-tubulin complex component 3. | 0.798 |
DNMT1 | Tubgcp6 | A0A4C1W9L3 | A0A4C1V8L9 | Cytosine-specific methyltransferase. | Gamma-tubulin complex component 6. | 0.798 |
DNMT1 | tubgcp3 | A0A4C1W9L3 | A0A4C1UZ53 | Cytosine-specific methyltransferase. | Gamma-tubulin complex component. | 0.798 |
DNMT1-2 | DNMT1 | A0A4C1WAM7 | A0A4C1W9L3 | DNA (Cytosine-5)-methyltransferase 1. | Cytosine-specific methyltransferase. | 0.487 |
DNMT1-2 | Grip84-2 | A0A4C1WAM7 | A0A4C1T0G4 | DNA (Cytosine-5)-methyltransferase 1. | Gamma-tubulin complex component. | 0.683 |
DNMT1-2 | TUBG1 | A0A4C1WAM7 | A0A4C1WWW1 | DNA (Cytosine-5)-methyltransferase 1. | Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. | 0.814 |
DNMT1-2 | Tubgcp3 | A0A4C1WAM7 | A0A4C1UYC5 | DNA (Cytosine-5)-methyltransferase 1. | Gamma-tubulin complex component 3. | 0.798 |
DNMT1-2 | Tubgcp6 | A0A4C1WAM7 | A0A4C1V8L9 | DNA (Cytosine-5)-methyltransferase 1. | Gamma-tubulin complex component 6. | 0.798 |
DNMT1-2 | tubgcp3 | A0A4C1WAM7 | A0A4C1UZ53 | DNA (Cytosine-5)-methyltransferase 1. | Gamma-tubulin complex component. | 0.798 |
EVAR_43713_1 | Grip84-2 | A0A4C1WX32 | A0A4C1T0G4 | Uncharacterized protein. | Gamma-tubulin complex component. | 0.672 |
EVAR_43713_1 | TUBG1 | A0A4C1WX32 | A0A4C1WWW1 | Uncharacterized protein. | Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. | 0.814 |
EVAR_43713_1 | Tubgcp3 | A0A4C1WX32 | A0A4C1UYC5 | Uncharacterized protein. | Gamma-tubulin complex component 3. | 0.798 |
EVAR_43713_1 | Tubgcp6 | A0A4C1WX32 | A0A4C1V8L9 | Uncharacterized protein. | Gamma-tubulin complex component 6. | 0.798 |
EVAR_43713_1 | tubgcp3 | A0A4C1WX32 | A0A4C1UZ53 | Uncharacterized protein. | Gamma-tubulin complex component. | 0.798 |
Grip84-2 | DNMT1 | A0A4C1T0G4 | A0A4C1W9L3 | Gamma-tubulin complex component. | Cytosine-specific methyltransferase. | 0.683 |
Grip84-2 | DNMT1-2 | A0A4C1T0G4 | A0A4C1WAM7 | Gamma-tubulin complex component. | DNA (Cytosine-5)-methyltransferase 1. | 0.683 |
Grip84-2 | EVAR_43713_1 | A0A4C1T0G4 | A0A4C1WX32 | Gamma-tubulin complex component. | Uncharacterized protein. | 0.672 |
page 1 of 4