STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH1G patch domain-containing protein 1. (577 aa)    
Predicted Functional Partners:
Syf2
Pre-mRNA-splicing factor Syf2.
    
  0.922
wdr83
WD repeat domain-containing protein 83.
    
 
 0.910
Ccdc12
Coiled-coil domain-containing protein 12.
    
 0.880
CCDC94
Coiled-coil domain-containing protein 94.
    
  0.866
EVAR_41485_1
WD_REPEATS_REGION domain-containing protein.
    
 
 0.845
cyp33
Peptidyl-prolyl cis-trans isomerase E.
   
  0.807
PPIL2
Peptidyl-prolyl cis-trans isomerase-like 2.
   
  0.784
Shb
SH2 domain-containing adapter protein B.
    
  0.765
PPIL4
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides.
   
  0.763
NSRP1
Nuclear speckle splicing regulatory protein 1.
  
 
  0.741
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.