Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Arp2 | EVAR_72560_1 | A0A4C1URT9 | A0A4C1T992 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Uncharacterized protein. | 0.667 |
Arp2 | Mlc-c | A0A4C1URT9 | A0A4C1VRY9 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Myosin-2 essential light chain. | 0.466 |
Arp2 | RAB11FIP1 | A0A4C1URT9 | A0A4C1USK7 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Rab11 family-interacting protein 1. | 0.735 |
Arp2 | RAB11FIP5 | A0A4C1URT9 | A0A4C1T6L0 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Rab11 family-interacting protein 5. | 0.735 |
Arp2 | Rab11a | A0A4C1URT9 | A0A4C1TLV8 | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | Ras-related protein Rab-11A. | 0.529 |
EVAR_24813_1 | EVAR_72560_1 | A0A4C1W0S5 | A0A4C1T992 | Uncharacterized protein. | Uncharacterized protein. | 0.771 |
EVAR_72560_1 | Arp2 | A0A4C1T992 | A0A4C1URT9 | Uncharacterized protein. | Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament. | 0.667 |
EVAR_72560_1 | EVAR_24813_1 | A0A4C1T992 | A0A4C1W0S5 | Uncharacterized protein. | Uncharacterized protein. | 0.771 |
EVAR_72560_1 | Khc | A0A4C1T992 | A0A4C1T8L6 | Uncharacterized protein. | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | 0.665 |
EVAR_72560_1 | LRGUK | A0A4C1T992 | A0A4C1TRZ6 | Uncharacterized protein. | Leucine-rich repeat and guanylate kinase domain-containing protein. | 0.858 |
EVAR_72560_1 | Miro | A0A4C1T992 | A0A4C2A1F9 | Uncharacterized protein. | Mitochondrial Rho GTPase. | 0.675 |
EVAR_72560_1 | Mlc-c | A0A4C1T992 | A0A4C1VRY9 | Uncharacterized protein. | Myosin-2 essential light chain. | 0.733 |
EVAR_72560_1 | Mlc1 | A0A4C1T992 | A0A4C1UIT4 | Uncharacterized protein. | Myosin light chain alkali. | 0.733 |
EVAR_72560_1 | RAB11FIP1 | A0A4C1T992 | A0A4C1USK7 | Uncharacterized protein. | Rab11 family-interacting protein 1. | 0.716 |
EVAR_72560_1 | RAB11FIP5 | A0A4C1T992 | A0A4C1T6L0 | Uncharacterized protein. | Rab11 family-interacting protein 5. | 0.716 |
EVAR_72560_1 | Rab11a | A0A4C1T992 | A0A4C1TLV8 | Uncharacterized protein. | Ras-related protein Rab-11A. | 0.949 |
Khc | EVAR_72560_1 | A0A4C1T8L6 | A0A4C1T992 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Uncharacterized protein. | 0.665 |
Khc | Miro | A0A4C1T8L6 | A0A4C2A1F9 | Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. | Mitochondrial Rho GTPase. | 0.527 |
LRGUK | EVAR_72560_1 | A0A4C1TRZ6 | A0A4C1T992 | Leucine-rich repeat and guanylate kinase domain-containing protein. | Uncharacterized protein. | 0.858 |
LRGUK | Miro | A0A4C1TRZ6 | A0A4C2A1F9 | Leucine-rich repeat and guanylate kinase domain-containing protein. | Mitochondrial Rho GTPase. | 0.730 |
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