STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DHX8-3ATP-dependent RNA helicase DHX8. (523 aa)    
Predicted Functional Partners:
Cherp
Calcium homeostasis endoplasmic reticulum protein.
   
 0.942
Slu7
Pre-mRNA-splicing factor SLU7.
    
 0.939
Syf2
Pre-mRNA-splicing factor Syf2.
    
 0.932
smd2
Small nuclear ribonucleoprotein Sm D2.
   
 0.907
prpf18
Pre-mRNA-splicing factor 18.
   
 0.907
NOL6
Nucleolar protein 6.
   
  0.907
Snrpd1
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
    
 0.907
DIEXF
Digestive organ expansion factor homolog.
   
 0.906
EVAR_35417_1
Uncharacterized protein.
   
 0.905
CCDC94
Coiled-coil domain-containing protein 94.
    
 0.902
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.