STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pdcd7Programmed cell death protein 7. (330 aa)    
Predicted Functional Partners:
EVAR_41481_1
Uncharacterized protein.
   
 0.901
Bap60
Brahma-associated protein of 60 kDa.
    
 0.880
snRNP-U1-70K
U1 small nuclear ribonucleoprotein 70 kDa.
    
 0.876
EVAR_81131_1
RRM domain-containing protein.
    
 0.876
MYSM1
Histone H2A deubiquitinase MYSM1.
   
 0.866
EVAR_53332_1
HMG box domain-containing protein.
    
 0.856
EVAR_74504_1
Uncharacterized protein.
    
   0.794
SmF
Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
  0.792
SNRPG
Small nuclear ribonucleoprotein G.
    
  0.774
SmD3
Small nuclear ribonucleoprotein Sm D3.
    
  0.769
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.