Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CUL5 | Ubc6 | A0A4C1Y911 | A0A4C1TMA9 | Cullin-5; Belongs to the cullin family. | Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. | 0.500 |
CUL5 | Ubr3-7 | A0A4C1Y911 | A0A4C1U5U0 | Cullin-5; Belongs to the cullin family. | E3 ubiquitin-protein ligase Ubr3. | 0.573 |
HECTD1 | Ubr3-7 | A0A4C1YZ67 | A0A4C1U5U0 | E3 ubiquitin-protein ligase HECTD1. | E3 ubiquitin-protein ligase Ubr3. | 0.459 |
HECTD1 | Ufd4 | A0A4C1YZ67 | A0A4C1Z4S3 | E3 ubiquitin-protein ligase HECTD1. | E3 ubiquitin-protein ligase Ufd4. | 0.417 |
Ubc6 | CUL5 | A0A4C1TMA9 | A0A4C1Y911 | Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. | Cullin-5; Belongs to the cullin family. | 0.500 |
Ubc6 | Ubr3-7 | A0A4C1TMA9 | A0A4C1U5U0 | Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. | E3 ubiquitin-protein ligase Ubr3. | 0.434 |
Ubr3-7 | CUL5 | A0A4C1U5U0 | A0A4C1Y911 | E3 ubiquitin-protein ligase Ubr3. | Cullin-5; Belongs to the cullin family. | 0.573 |
Ubr3-7 | HECTD1 | A0A4C1U5U0 | A0A4C1YZ67 | E3 ubiquitin-protein ligase Ubr3. | E3 ubiquitin-protein ligase HECTD1. | 0.459 |
Ubr3-7 | Ubc6 | A0A4C1U5U0 | A0A4C1TMA9 | E3 ubiquitin-protein ligase Ubr3. | Ubiquitin-conjugating enzyme E2-17 kDa; Belongs to the ubiquitin-conjugating enzyme family. | 0.434 |
Ubr3-7 | Ufd4 | A0A4C1U5U0 | A0A4C1Z4S3 | E3 ubiquitin-protein ligase Ubr3. | E3 ubiquitin-protein ligase Ufd4. | 0.459 |
Ufd4 | HECTD1 | A0A4C1Z4S3 | A0A4C1YZ67 | E3 ubiquitin-protein ligase Ufd4. | E3 ubiquitin-protein ligase HECTD1. | 0.417 |
Ufd4 | Ubr3-7 | A0A4C1Z4S3 | A0A4C1U5U0 | E3 ubiquitin-protein ligase Ufd4. | E3 ubiquitin-protein ligase Ubr3. | 0.459 |