STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
degs1Sphingolipid delta(4)-desaturase DES1. (164 aa)    
Predicted Functional Partners:
EVAR_45076_1
Neutral sphingomyelinase.
     
 0.765
EVAR_60254_1
Reverse transcriptase domain-containing protein.
   
 
 0.762
bwa
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
   
 
 0.751
Sgms1
Phosphatidylcholine:ceramide cholinephosphotransferase 1.
   
 
 0.744
Sgpp1
Sphingosine-1-phosphate phosphatase 1.
     
 0.727
SMPD4
Sphingomyelin phosphodiesterase 4.
     
 0.716
CERS6
Ceramide synthase 6.
    
 0.656
CERS3
Ceramide synthase 3.
    
 0.656
Ugcg
Ceramide glucosyltransferase.
   
 
 0.625
ugcg-a
Ceramide glucosyltransferase-A.
   
 
 0.625
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.