STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdxBErythronate-4-phosphate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (369 aa)    
Predicted Functional Partners:
Psat1
Phosphoserine aminotransferase.
  
 0.941
serC
Phosphoserine aminotransferase.
  
 0.941
aceA
Isocitrate lyase.
    
 0.887
folA
Dihydrofolate reductase.
  
 0.838
thyA
Thymidylate synthase.
  
 0.838
PSPH
Phosphoserine phosphatase.
  
 0.836
EVAR_63294_1
Protein hairless.
    
 0.824
EVAR_2085_1
HTH lacI-type domain-containing protein.
  
 
 0.823
trpB
Tryptophan synthase beta chain.
  
 0.823
SHMT1
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.798
Your Current Organism:
Eumeta japonica
NCBI taxonomy Id: 151549
Other names: E. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.